4973 Na_Ca_ex
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4973 chr_5 Na_Ca_ex 54514 56823 - Na_Ca_ex

Synonyms

NCBI ID Ensembl Genomes exon ID
7448441 Thaps4973.3, Thaps4973.2, Thaps4973.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0162

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9911

262371

AAA_12 superfamily
0.8808

34590

nt_trans superfamily
0.877

5614

hypothetical protein
0.874

8535

hypothetical protein
0.8712

5552

hypothetical protein
0.8705

1042

hypothetical protein
0.8672

24828

CAP_GLY
0.8653

12836

EEP superfamily
0.8649

23467

hypothetical protein
0.8645

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 107.303 4.00E-27 490 - 628 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 107.303 4.00E-27 490 - 628 superfamily 250805
ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] - 102.296 6.27E-24 440 - 627 multi-dom 223604

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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