6071 (RL22) Ribosomal_L22e
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6071 chr_6 (RL22) Ribosomal_L22e 642374 643004 + Ribosomal_L22e
NCBI ID Ensembl Genomes exon ID
7443571 Thaps6071.1, Thaps6071.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046
Normalized Mean Residue
Thaps_bicluster_0205
0.26
(Rpl27) KOW_RPL27
0.9324
(RL36) Ribosomal_L36e
0.9178
(RS21) Ribosomal_S21e
0.8978
(RS15A) PTZ00158
0.8968
(RL23a) PTZ00191
0.8917
S1_S28E
0.8874
(RL44) PTZ00157
0.8868
Ubiquitin
0.8863
hypothetical protein
0.8822
PTZ00106
0.8776
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L22e Ribosomal L22e protein family; Ribosomal L22e protein family. cl03348 165.472 1.84E-53 7 - 121 specific 250855
Ribosomal_L22e superfamily Ribosomal L22e protein family; Ribosomal L22e protein family. - 165.472 1.84E-53 7 - 121 superfamily 261695
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_39687 PHATRDRAFT_39687 228705 308638 416466 Cre07.g357850.t1.2 AT3G05560.3 353368
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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