6291 COG1741
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6291 chr_6 COG1741 1205328 1206618 - COG1741

Synonyms

NCBI ID Ensembl Genomes exon ID
7442393 Thaps6291.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0286

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8885

1500

Thioredoxin_like superfamily
0.8736

23332

COG0790
0.8651

33970

rad25
0.8597

23989

Exo70 superfamily
0.856

10398

hypothetical protein
0.8543

1600

Glyco_tranf_GTA_type superfamily
0.8492

23769

hypothetical protein
0.8483

10753

hypothetical protein
0.8482

37139

CtaG_Cox11 superfamily
0.845

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 86.9435 6.67E-21 156 - 235 superfamily 251469
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 86.9435 6.67E-21 156 - 235 superfamily 251469
Pirin_C superfamily Pirin C-terminal cupin domain; This region is found the C-terminal half of the Pirin protein. - 81.0774 1.04E-18 321 - 406 superfamily 253351
COG1741 Pirin-related protein [General function prediction only] - 151.689 2.12E-42 126 - 403 multi-dom 224655

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46546 PHATRDRAFT_46546 252510 100646 119076 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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