6480 P4Hc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6480 chr_6 P4Hc 1686919 1688506 + P4Hc

Synonyms

NCBI ID Ensembl Genomes exon ID
7444578 Thaps6480.1, Thaps6480.2, Thaps6480.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0116
 0.38

Most Highly Correlated Transcripts

7934

hypothetical protein
0.8925

bd1306

(bd1306) NA
0.8905

bd463

(bd463) Aa_trans superfamily
0.8891

bd1893

(bd1893) NA
0.8859

bd1857

(bd1857) DnaJ
0.8847

270222

0.8817

bd760

(bd760) ZnMc superfamily
0.8807

bd1645

(bd1645) tpt
0.8724

268650

(APB2) PTZ00429
0.862

bd718

(bd718) PRK10387
0.8607

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P4Hc Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen... cl17304 109.015 4.27E-28 274 - 450 specific 214780
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 109.015 4.27E-28 274 - 450 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 204009 305708 367381 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0016706 GO:0019538 -

GO:0016706

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

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