6810 MRP-L27 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6810	chr_7	MRP-L27 superfamily	544929	545418	-	MRP-L27 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446235	Thaps6810.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0455

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0025	0.38	0.0000000018 0.000000059

Most Highly Correlated Transcripts

2934 hypothetical protein 0.8452	plastid_psb28 0.8318	13448 Sec1 0.8262	2284 hypothetical protein 0.8244	4691 hypothetical protein 0.8153	12836 EEP superfamily 0.8071
16114 PLN02350 0.8069	7859 hypothetical protein 0.8064	35116 SF3b10 0.8052	10198 rRNA_methylase superfamily 0.797

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MRP-L27 superfamily		Mitochondrial ribosomal protein L27; Members of this family of proteins are components of the...	-	72.4319	6.54E-17	86 - 145	superfamily	255573

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	275431	194307	Not available	Not available	AT5G40080.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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