6930 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6930 chr_7 MFS 850149 852501 - MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7449227 Thaps6930.1, Thaps6930.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0350

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9975

262692

0.869

2058

hypothetical protein
0.8312

263917

0.8034

36641

Aldolase_Class_I superfamily
0.639

9307

hypothetical protein
0.6341

263864

0.623

bd1772

(bd1772) NA
0.6173

263039

0.6153

11655

hypothetical protein
0.6116

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 78.8949 4.47E-16 119 - 493 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 78.8949 4.47E-16 119 - 493 superfamily 119392
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 78.6156 5.98E-16 105 - 472 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 189075 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016020 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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