7359 (Tp_AP2-EREBP8) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7359 chr_8 (Tp_AP2-EREBP8) regulator [Rayko] 55624 57171 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7443432 Thaps7359.1, Thaps7359.2, Thaps7359.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0152

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0009
 0.42

Most Highly Correlated Transcripts

23654

(Tp_AP2-EREBP6) regulator [Rayko]
0.8873

bd457

(bd457) NA
0.8226

2027

hypothetical protein
0.7558

bd787

(bd787) NA
0.7431

7842

(Tp_AP2-EREBP11) regulator [Rayko]
0.7425

24049

hypothetical protein
0.7149

bd763

(bd763) NA
0.7072

8598

hypothetical protein
0.7053

3065

hypothetical protein
0.7002

bd683

(bd683) Peptidase_M14_like superfamily
0.6905

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016491 GO:0003700 GO:0005634 GO:0006355 -

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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