7451 PAS_9
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7451 chr_8 PAS_9 267540 268647 - PAS_9

Synonyms

NCBI ID Ensembl Genomes exon ID
7443474 Thaps7451.1, Thaps7451.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0450

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0198
 0.40

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9047

bd1439

(bd1439) ycf35
0.8952

bd1841

(bd1841) CAP10 superfamily
0.8807

bd885

(bd885) NA
0.8772

bd1787

(bd1787) GLTP
0.854

bd1934

(bd1934) NA
0.851

bd1954

(bd1954) NA
0.8449

bd884

(bd884) NA
0.8419

bd1946

(bd1946) NA
0.8229

bd1840

(bd1840) NA
0.8161

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAS_9 PAS domain; PAS domain. - 68.5639 1.54E-14 225 - 334 multi-dom 257751

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45495 PHATRDRAFT_45495 190964 314197 207698 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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