7648 MIP-T3Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7648	chr_8	MIP-T3	782758	784523	-	MIP-T3

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449820	Thaps7648.3, Thaps7648.1, Thaps7648.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0451

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0022	0.44	0.082 5300

Most Highly Correlated Transcripts

bd1851 (bd1851) NA 0.8665	bd1890 (bd1890) NA 0.8279	3131 S_TKc 0.8248	21090 hypothetical protein 0.8234	bd833 (bd833) NA 0.8218	20248 AAA_12 superfamily 0.8031
264774 FH2 superfamily 0.8001	18662 ADK 0.7978	bd850 (bd850) NA 0.7882	bd1935 (bd1935) NA 0.7847

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MIP-T3		Microtubule-binding protein MIP-T3; This protein, which interacts with both microtubules and TRAF3...	-	65.6914	1.08E-11	256 - 313	multi-dom	255846
MIP-T3		Microtubule-binding protein MIP-T3; This protein, which interacts with both microtubules and TRAF3...	-	65.6914	1.08E-11	256 - 313	multi-dom	255846

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	252292	Cre11.g467739.t1.1	Not available	287159

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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