8051 PLN02517 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8051 chr_9 PLN02517 superfamily 630128 632570 - PLN02517 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453042 Thaps8051.2, Thaps8051.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0134

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0048
 0.39

Most Highly Correlated Transcripts

21259

UAA
0.9196

5319

DPPIV_N
0.9096

262287

hypothetical protein
0.9073

24174

DUF1336 superfamily
0.9006

36372

S_TKc
0.8947

2593

ANK
0.8917

21947

GlcNAc superfamily
0.8874

25162

hypothetical protein
0.8865

21220

KU superfamily
0.8854

263010

KU superfamily
0.885

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02517 superfamily phosphatidylcholine-sterol O-acyltransferase - 102.53 7.19E-23 111 - 266 superfamily 178132

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 245361 288981 212640 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004607 GO:0006629 GO:0005524 GO:0016887 GO:0004622 -

GO:0004607

phosphatidylcholine-sterol O-acyltransferase activity

Details: 
Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0004622

lysophospholipase activity

Details: 
Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate.
GO Category: 
MF

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