8069 (TUB2) PLN00220
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
8069 chr_9 (TUB2) PLN00220 671389 673234 - PLN00220
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0091
Normalized Mean Residue
Thaps_bicluster_0045
0.44
(bd439) POLBc_alpha
0.8471
(bd1893) NA
0.8437
(bd463) Aa_trans superfamily
0.8234
(bd856) NA
0.8215
(sig3) sig3-like protein
0.8127
(bd1173) S_TKc
0.812
(bd1081) NA
0.8118
(bd758) NA
0.8108
(bd917) NA
0.8103
(Tp_Myb1R_SHAQKYF9b) MYB DNA binding protein/ transcription factor-like protein
0.7897
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and... cl10017 937.852 0 2 - 426 specific 100016
Tubulin_FtsZ superfamily Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well... - 937.852 0 2 - 426 superfamily 263945
PLN00220 tubulin beta chain; Provisional - 965.441 0 1 - 430 multi-dom 215107
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_21122 PHATR_21122 275160 198602 468958 Cre12.g549550.t1.2 AT5G62700.1 507388
KEGG description KEGG Pathway
Phagosome map04145
GO:0005198 GO:0005874 GO:0007018 GO:0003924 GO:0005525 GO:0043234 GO:0051258 -

structural molecule activity

Details: 
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.
GO Category: 
MF

microtubule

Details: 
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO Category: 
CC

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

protein complex

Details: 
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.
GO Category: 
CC

protein polymerization

Details: 
The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
GO Category: 
BP
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