8415 P4Hc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8415 chr_10 P4Hc 533439 535020 - P4Hc

Synonyms

NCBI ID Ensembl Genomes exon ID
7445889 Thaps8415.1, Thaps8415.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0132

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0264
 0.37

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9507

3310

hypothetical protein
0.935

25509

hypothetical protein
0.917

261400

NA
0.9121

32139

hypothetical protein
0.9079

6889

hypothetical protein
0.9065

4867

SBF superfamily
0.9052

2494

UAA
0.9045

25576

Galactosyl_T superfamily
0.9034

24328

ANK
0.9027

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P4Hc Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen... cl17304 100.155 9.69E-25 298 - 477 specific 214780
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 100.155 9.69E-25 298 - 477 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49523 PHATRDRAFT_49523 181303 228196 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0016706 GO:0019538 -

GO:0016706

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

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