8416 COG0385
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8416 chr_10 COG0385 535305 536477 + COG0385

Synonyms

NCBI ID Ensembl Genomes exon ID
7446843 Thaps8416.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

270222

0.9429

bd1808

(bd1808) NA
0.9222

bd1941

(bd1941) NA
0.8928

bd721

(bd721) NA
0.8777

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8761

bd410

(bd410) HNHc
0.8689

bd1793

(bd1793) NA
0.8529

bd1787

(bd1787) GLTP
0.8446

bd1841

(bd1841) CAP10 superfamily
0.8415

20906

hypothetical protein
0.8261

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0385 Predicted Na+-dependent transporter [General function prediction only] cl19217 128.89 5.08E-34 85 - 381 specific 223462
SBF superfamily Sodium Bile acid symporter family; This family consists of Na+/bile acid co-transporters. These... - 128.89 5.08E-34 85 - 381 superfamily 267570

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 178753 175214 444387 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006814 GO:0008508 GO:0016020 -

GO:0006814

sodium ion transport

Details: 
The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008508

bile acid:sodium symporter activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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