8968 PA28_beta superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8968 chr_12 PA28_beta superfamily 187818 188597 + PA28_beta superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443245 Thaps8968.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0381

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0031
 0.36

Most Highly Correlated Transcripts

270222

0.8251

269593

(RPT4) RPT1
0.7837

10322

hypothetical protein
0.7805

22245

hypothetical protein
0.7766

517

(PSA1) proteasome_alpha_type_1
0.7697

5410

hypothetical protein
0.7672

23509

hypothetical protein
0.7628

38129

(RPN5) PCI superfamily
0.7622

34219

hypothetical protein
0.7612

13427

AarF
0.7553

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PA28_beta superfamily Proteasome activator pa28 beta subunit; PA28 activator complex (also known as 11s regulator of 20S... - 59.5899 1.63E-11 63 - 147 superfamily 145416

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47887 PHATRDRAFT_47887 270577 321055 Not available Not available Not available 553779

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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