9174 DUF563Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9174	chr_12	DUF563	742894	744849	+	DUF563

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447989	Thaps9174.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0048	0.39	71000 7300

Most Highly Correlated Transcripts

20944 Glyco_tranf_GTA_type superfamily 0.9261	5066 hypothetical protein 0.9229	23517 PRK13759 0.9192	4565 hypothetical protein 0.9185	32139 hypothetical protein 0.914	2494 UAA 0.9126
3310 hypothetical protein 0.9118	3803 hypothetical protein 0.9117	20665 hypothetical protein 0.9108	262467 MFS 0.9107

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF563		Protein of unknown function (DUF563); Family of uncharacterized proteins.	cl15705	75.529	1.33E-15	503 - 615	specific	252682
DUF563 superfamily		Protein of unknown function (DUF563); Family of uncharacterized proteins.	-	75.529	1.33E-15	503 - 615	superfamily	265766

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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