9261 HP_PGM_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9261	chr_12	HP_PGM_like	1049833	1050927	+	HP_PGM_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448035	Thaps9261.2, Thaps9261.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0106

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0007	0.40	0.00084 2400

Most Highly Correlated Transcripts

25944 p450 superfamily 0.8367	34191 CobN_like 0.8348	10903 hypothetical protein 0.8209	7475 hypothetical protein 0.8149	3071 NA 0.8059	23359 hypothetical protein 0.799
8414 NA 0.7966	6422 hypothetical protein 0.7955	3302 hypothetical protein 0.7935	25281 NADB_Rossmann superfamily 0.7926

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HP_PGM_like		Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly...	cl11399	65.036	4.85E-13	46 - 289	specific	132718
HP superfamily		Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases;...	-	65.036	4.85E-13	46 - 289	superfamily	264352

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	141786	Not available	243338	Cre12.g518950.t1.2	AT2G17280.2	472363

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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