9652 MDR8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9652 chr_13 MDR8 1031265 1033373 - MDR8

Synonyms

NCBI ID Ensembl Genomes exon ID
7450536 Thaps9652.1, Thaps9652.2, Thaps9652.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0090

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0078
 0.42

Most Highly Correlated Transcripts

bd856

(bd856) NA
0.9547

bd622

(bd622) NA
0.9107

bd886

(bd886) NA
0.9067

bd1081

(bd1081) NA
0.8991

bd1173

(bd1173) S_TKc
0.8932

bd765

(bd765) NA
0.8918

22281

hypothetical protein
0.8849

1937

hypothetical protein
0.8843

bd1852

(bd1852) NA
0.8839

bd950

(bd950) NA
0.8805

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; This... cl16912 405.879 8.31E-137 284 - 622 specific 176234
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 405.879 8.31E-137 284 - 622 superfamily 266485
AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] - 93.4211 6.28E-21 287 - 612 multi-dom 223992

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37808 PHATRDRAFT_37808 234758 295003 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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