9861 DUF563Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9861	chr_14	DUF563	566731	568423	+	DUF563

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451252	Thaps9861.2, Thaps9861.3, Thaps9861.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0404

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0126	0.34	1.5 22000

Most Highly Correlated Transcripts

13448 Sec1 0.9167	2494 UAA 0.9148	3310 hypothetical protein 0.9141	4565 hypothetical protein 0.9118	10474 hypothetical protein 0.904	22468 hypothetical protein 0.9039
25509 hypothetical protein 0.9037	5921 hypothetical protein 0.9031	32139 hypothetical protein 0.9027	31052 S_TKc 0.901

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF563		Protein of unknown function (DUF563); Family of uncharacterized proteins.	cl15705	66.6694	7.18E-13	338 - 481	specific	252682
DUF563 superfamily		Protein of unknown function (DUF563); Family of uncharacterized proteins.	-	66.6694	7.18E-13	338 - 481	superfamily	265766

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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