ThpsCt020 (trnA(ugc)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt020	chloroplast	(trnA(ugc))	68627	68699	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524878	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0065

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0122	0.29

Most Highly Correlated Transcripts

ThpsCt029 (trnA(ugc)') 0.9845	ThpsCt019 (trnI(gau)) 0.9825	ThpsCt030 (trnI(gau)') 0.9812	bd668 (bd668) NA 0.9505	ThpsCr001 (rns) 0.9289	ThpsCr006 (rns') 0.9264
bd137 (bd137) Motor_domain superfamily 0.9182	bd1313 (bd1313) psbH 0.9109	bd1378 (bd1378) atpI 0.8937	bd1949 (bd1949) NA 0.8917

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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