bd1237 (bd1237) 3a01204
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1237 bd_23x33 (bd1237) 3a01204 85682 87672 - 3a01204

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0500

Most Highly Correlated Transcripts

12074

hypothetical protein
0.9153

26467

hypothetical protein
0.9

10537

DEXDc
0.8964

264907

(SelD) selD
0.8893

10713

hypothetical protein
0.8754

bd933

(bd933) NA
0.8741

25857

hypothetical protein
0.8728

24978

hypothetical protein
0.8711

18351

Maf
0.8628

bd815

(bd815) NA
0.8596

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 242.947 5.03E-76 2 - 225 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 122.366 6.53E-32 311 - 515 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 122.366 6.53E-32 311 - 515 superfamily 266576
3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other]. - 397.88 1.72E-130 2 - 569 multi-dom 233207

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14778 PHATRDRAFT_14778 Not available Not available Not available Not available Not available 565103

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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