bd1911 (bd1911) Ribosomal_L1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1911 bd_26x41 (bd1911) Ribosomal_L1 37794 40065 - Ribosomal_L1

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0255

Most Highly Correlated Transcripts

ThpsCp030

(rpl12) ribosomal protein L12
0.9627

ThpsCp092

(psbW) photosystem II protein W
0.9054

ThpsCp029

(rpl1) ribosomal protein L1
0.9028

ThpsCp028

(rpl11) ribosomal protein L11
0.8986

ThpsCp089

(rps16) ribosomal protein S16
0.8953

ThpsCp057

(secG) preprotein translocase SecG subunit
0.8892

bd93

(bd93) NA
0.8778

ThpsCp075

(ycf89) hypothetical protein
0.8774

ThpsCp142

(ycf89') hypothetical protein
0.8774

ThpsCt022

(trnH(gug))
0.8707

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L1 Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... cl00322 210.503 5.22E-68 23 - 224 specific 238235
Ribosomal_L1 superfamily Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... - 210.503 5.22E-68 23 - 224 superfamily 260353

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 468608 Cre02.g088900.t1.2 AT3G63490.1 327273

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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