bd74 (bd74) T6A_YgjDThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd74	bd_20x5	(bd74) T6A_YgjD	13522	14856	+	T6A_YgjD

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0223

Most Highly Correlated Transcripts

38662 BING4CT 0.9223	25560 PseudoU_synth_RluCD_like 0.9152	25359 hypothetical protein 0.9121	bd621 (bd621) NA 0.8913	28100 DHBP_synthase 0.8899	25701 hypothetical protein 0.8789
5294 hypothetical protein 0.8782	8259 hypothetical protein 0.8771	14109 SrmB 0.8738	24793 DUF501 superfamily 0.87

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
T6A_YgjD		tRNA threonylcarbamoyl adenosine modification protein YgjD; This model represents bacterial members...	-	378.303	1.83E-130	5 - 336	multi-dom	234330

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_9987	PHATRDRAFT_9987	159472	295584	54203	Cre15.g639400.t1.2	AT2G45270.1	246172

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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