PHATRDRAFT_11236 dna repair protein (PRK11823)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11236	chr_5	dna repair protein (PRK11823)	145873	147471	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0062

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0208	0.30	77 39000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RecA-like_NTPases superfamily		RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and...	-	390.063	6.80E-132	13 - 453	superfamily	266574
ChlI superfamily		Subunit ChlI of Mg-chelatase; Subunit ChlI of Mg-chelatase.	-	61.2776	1.86E-11	438 - 500	superfamily	257860
PRK11823		DNA repair protein RadA; Provisional	-	526.584	0	10 - 500	multi-dom	236994

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262474		Not available	148580	196787	Not available	Cre07.g317908.t1.2	AT5G50340.1	450421

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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