Phatr_hclust_0062 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0019363 pyridine nucleotide biosynthesis 0.0162359 1 Phatr_hclust_0062
GO:0006535 cysteine biosynthesis from serine 0.0242577 1 Phatr_hclust_0062
GO:0030655 beta-lactam antibiotic catabolism 0.0242577 1 Phatr_hclust_0062
GO:0006816 calcium ion transport 0.0242577 1 Phatr_hclust_0062
GO:0008152 metabolism 0.0290929 1 Phatr_hclust_0062
GO:0046677 response to antibiotic 0.032216 1 Phatr_hclust_0062
GO:0006118 electron transport 0.0359327 1 Phatr_hclust_0062
GO:0006777 Mo-molybdopterin cofactor biosynthesis 0.0479444 1 Phatr_hclust_0062
GO:0009231 riboflavin biosynthesis 0.0479444 1 Phatr_hclust_0062
GO:0006564 L-serine biosynthesis 0.0634247 1 Phatr_hclust_0062

Members

PHATRDRAFT_46881 :
PHATRDRAFT_43598 : kelch motif family protein
PHATRDRAFT_45332 :
PHATRDRAFT_36084 : (FlaRed superfamily)
PHATRDRAFT_50498 : (C2)
PHATRDRAFT_48449 : chalcone-flavanone isomerase-related (Chalcone superfamily)
PHATRDRAFT_44622 : fatty acid desaturase family protein (Membrane-FADS-like superfamily)
PHATRDRAFT_46518 :
PHATRDRAFT_44679 : (RHOD superfamily)
PHATRDRAFT_45431 : histone deacetylase superfamily (Arginase_HDAC superfamily)
PHATRDRAFT_50200 :
PHATRDRAFT_50054 :
PHATRDRAFT_45373 :
PHATRDRAFT_48791 :
PHATRDRAFT_44118 : hypothetical orf yml018cp
PHATRDRAFT_20124 : small gtp-binding protein (Obg_CgtA)
PHATRDRAFT_43772 : conserved protein (DUF221 superfamily)
PHATRDRAFT_49774 :
PHATRDRAFT_14307 : possible ferredoxin (2fe-2s)
PHATRDRAFT_43140 : voltage-gated shaker-like k+subunit beta kcnab (Aldo_ket_red)
PHATRDRAFT_48204 : alcohol oxidase (NAD_binding_8 superfamily)
PHATRDRAFT_12172 : riboflavin kinase (Flavokinase)
PHATRDRAFT_26077 : d-isomer specific 2-hydroxyacidnad-binding (2-Hacid_dh_1)
PHATRDRAFT_11236 : dna repair protein (PRK11823)
PHATRDRAFT_34060 : pentatricopeptiderepeat-containing protein
PHATRDRAFT_51608 : (Aldo_ket_red)
PHATRDRAFT_46084 :
PHATRDRAFT_40979 :
PHATRDRAFT_8940 : fkbp-type peptidyl-prolyl cis-trans isomerase (FKBP_C)
PHATRDRAFT_45348 : cupin 4 (Cupin_8 superfamily)
PHATRDRAFT_45830 : (NADB_Rossmann superfamily)
PHATRDRAFT_33738 : transmembrane protein
PHATRDRAFT_16130 : protein kinase c inhibitor (PKCI_related)
PHATRDRAFT_44398 : abc transporter g family protein (ABC_ATPase)
PHATRDRAFT_54536 : glycosidefamily 30 (Glyco_hydro_30 superfamily)
PHATRDRAFT_47746 : (Tub_2 superfamily)
PHATRDRAFT_35516 :
PHATRDRAFT_47925 : monooxygenase family protein (NAD_binding_8 superfamily)
PHATRDRAFT_44306 : protein phosphatase 2c (PP2Cc)
PHATRDRAFT_15089 : thioredoxin h (TRX_family)
PHATRDRAFT_8113 : blue light receptor (PAS_9)
PHATRDRAFT_31544 : glycine oxidase (NAD_binding_8 superfamily)
PHATRDRAFT_47762 : arystal structuremidohydrolase bh0493 from bacillus halodurans c-125 (UxaC superfamily)
PHATRDRAFT_13253 : (DUF1825 superfamily)
PHATRDRAFT_29887 : cg3714-isoform a (PLN02885)
PHATRDRAFT_46720 : transcriptional repressor (NADB_Rossmann superfamily)
PHATRDRAFT_49707 : endothelin-converting enzyme (PepO)
PHATRDRAFT_48745 :
PHATRDRAFT_9137 : molybdopterin synthase small subunit mocs2a (MoaE)
PHATRDRAFT_42701 :
PHATRDRAFT_13476 : serine acetyltransferase (cysE)
PHATRDRAFT_44510 :
PHATRDRAFT_46706 : biotin lipoate protein ligase-like protein (PTZ00276)
PHATRDRAFT_45125 : 4-hydroxybenzoate octaprenyltransferase (PT_UbiA superfamily)
PHATRDRAFT_40783 : hemolysin-related protein (TlyC)
PHATRDRAFT_48133 : probable proline iminopeptidase pip (prolyl aminopeptidase) (pro_imino_pep_2)
PHATRDRAFT_42934 : arylsulfatase b (AslA)
PHATRDRAFT_49014 : (PH)
PHATRDRAFT_43550 : (ABC_ATPase)
PHATRDRAFT_43057 :
PHATRDRAFT_47868 :
PHATRDRAFT_51040 : ataxia telangiectasia mutated (PI3Kc_like superfamily)
PHATRDRAFT_44362 : leucine-rich repeat containing protein (COG4886)
PHATRDRAFT_48959 : (Sec10 superfamily)
PHATRDRAFT_46729 : elg protein isoform 4 (DUF2414 superfamily)
PHATRDRAFT_228 : calcium atpase serca-like (ATPase-IIA1_Ca)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.302 0.00960265
Copper_SH Copper_SH -0.064 0.33966
Green_vs_Red_24h Green_vs_Red_24h -0.126 0.108871
Silver_SH Silver_SH -0.045 0.494691
Cadmium_1.2mg Cadmium_1.2mg -0.033 0.497857
BlueLight_24h BlueLight_24h -0.216 0.01
GreenLight_0.5h GreenLight_0.5h -2.328 0.000458716
RedLight_6h RedLight_6h -0.228 0.08
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h -0.370 0.000961538
light_6hr light_6hr -0.411 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.345 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h -0.137 0.00775862
Ammonia_SH Ammonia_SH -1.174 0.000344828
Simazine_SH Simazine_SH 0.270 0.000423729
Oil_SH Oil_SH 0.309 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH 0.074 0.3075
Cadmium_SH Cadmium_SH -0.029 0.71929
Blue_vs_Red_24h Blue_vs_Red_24h 0.028 0.832187
highlight_0to6h highlight_0to6h -0.405 0.000806452
BlueLight_0.5h BlueLight_0.5h -2.875 0.000462963
Dispersant_SH Dispersant_SH 0.135 0.0537037
light_16hr_dark_4hr light_16hr_dark_4hr 0.015 0.864989
light_15.5hr light_15.5hr -0.015 0.923382
light_10.5hr light_10.5hr -0.039 0.832071
Dispersed_oil_SH Dispersed_oil_SH 0.191 0.00631068
Si_free Si_free 0.042 0.608553
Re-illuminated_0.5h Re-illuminated_0.5h -2.916 0.000396825
Mixture_SH Mixture_SH -0.841 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h 0.149 0.218846
light_16hr_dark_30min light_16hr_dark_30min 0.175 0.21621
BlueLight_6h BlueLight_6h -0.078 0.452676
highlight_12to48h highlight_12to48h -0.340 0.000980392
RedLight_24h RedLight_24h -0.244 0.00675676
Dark_treated Dark_treated 0.339 0.392903
GreenLight_6h GreenLight_6h 0.059 0.609391
Cadmium_0.12mg Cadmium_0.12mg 0.016 0.55273
Blue_vs_Green_24h Blue_vs_Green_24h 0.154 0.00135135
RedLight_0.5h RedLight_0.5h -1.159 0.000555556
Green_vs_Red_6h Green_vs_Red_6h 0.287 0.00294118
Re-illuminated_24h Re-illuminated_24h -0.238 0.000657895

Motifs

MEME Output