PHATRDRAFT_12051 two-component response regulator (CitB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12051 chr_7 two-component response regulator (CitB) 496974 497666 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0272

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0007
 0.60

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 114.595 4.43E-32 3 - 124 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 114.595 4.43E-32 3 - 124 superfamily 267431
LuxR_C_like C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif... cl17315 54.848 1.17E-10 166 - 220 specific 99777
LuxR_C_like superfamily C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif... - 54.848 1.17E-10 166 - 220 superfamily 266624
CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal... - 121.257 1.38E-33 1 - 228 multi-dom 225107

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264268 Not available 142368 150280 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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