PHATRDRAFT_13114 ubiquitin-conjugating enzymej1 (UBCc)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13114	chr_10	ubiquitin-conjugating enzymej1 (UBCc)	902589	903140	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0411

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0235	0.24	1000 1900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBCc		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	cl00154	139.26	1.68E-42	8 - 122	specific	238117
UBCc superfamily		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	-	139.26	1.68E-42	8 - 122	superfamily	260221

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35107		Not available	154418	66422	456752	Cre03.g202897.t1.1	AT3G17000.1	479615

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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