PHATRDRAFT_13566 dna-directed rna polymerasethird largest subunit (RNAP_II_RPB3)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13566	chr_12	dna-directed rna polymerasethird largest subunit (RNAP_II_RPB3)	118050	119012	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0007

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNAP_II_RPB3		RPB3 subunit of Eukaryotic RNA polymerase II; The eukaryotic RPB3 subunit of RNA polymerase (RNAP)...	cl11409	336.498	4.14E-115	7 - 317	specific	132909
RNAP_RPB11_RPB3 superfamily		RPB11 and RPB3 subunits of RNA polymerase; The eukaryotic RPB11 and RPB3 subunits of RNA polymerase...	-	336.498	4.14E-115	7 - 317	superfamily	264356
PRK00783		DNA-directed RNA polymerase subunit D; Provisional	-	228.616	4.23E-73	7 - 317	multi-dom	234837

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
16440		Not available	267685	312302	197736	Cre10.g419750.t1.2	AT2G15430.1	554134

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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