PHATRDRAFT_16608 rufy1 isoform 4 (FYVE)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16608	chr_27	rufy1 isoform 4 (FYVE)	35140	35310	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0224

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0135	0.29	3000 1200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FYVE		FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with...	cl17764	55.9049	1.96E-12	1 - 56	specific	238022
FYVE superfamily		FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with...	-	55.9049	1.96E-12	1 - 56	superfamily	266823

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38788		Not available	165124	157316	Not available	Not available	Not available	479706

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments