PHATRDRAFT_16787 (MCT1_N)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16787	chr_28	(MCT1_N)	342184	342889	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0209

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MCT1_N		N-terminal domain of multiple copies T cell malignancies 1 and related proteins; This N-terminal...	cl16921	90.2863	1.39E-23	4 - 90	specific	211422
eIF2D_N_like superfamily		N-terminal domain of eIF2D, malignant T cell-amplified sequence 1 and related proteins; This N-...	-	90.2863	1.39E-23	4 - 90	superfamily	211517
PUA superfamily		PUA domain; The PUA domain named after Pseudouridine synthase and Archaeosine transglycosylase, was...	-	90.5702	2.36E-23	77 - 197	superfamily	260527

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3098		Not available	191170	65341	253625	Cre50.g761397.t1.1	AT1G09150.1	563407

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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