PHATRDRAFT_16944 histidyl-trna synthetase-like (HisS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_16944 chr_30 histidyl-trna synthetase-like (HisS) 99257 100570 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0010
 0.55

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is... cl00268 303.755 1.15E-100 13 - 332 specific 238396
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 303.755 1.15E-100 13 - 332 superfamily 260313
HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS... cl00266 82.9728 1.63E-19 348 - 438 specific 238436
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 82.9728 1.63E-19 348 - 438 superfamily 260312
HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] - 372.714 3.79E-125 4 - 437 multi-dom 223202

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42621 Not available Not available Not available Not available Cre02.g142352.t1.1 AT3G02760.1 559658

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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