PHATRDRAFT_17259 26s proteasome regulatory subunit s12 (mov34 protein) (PLN03246)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17259	chr_1	26s proteasome regulatory subunit s12 (mov34 protein) (PLN03246)	386711	387852	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0196

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0131	0.25	1300 19000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPN_RPN7_8		Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S...	cl13996	476.305	1.29E-169	25 - 301	specific	163693
MPN superfamily		Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains...	-	476.305	1.29E-169	25 - 301	superfamily	265414
PLN03246		26S proteasome regulatory subunit; Provisional	-	510.437	0	20 - 334	multi-dom	215645

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40962		Not available	176238	206303	414266	Cre06.g278256.t1.1	AT5G05780.1	349849

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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