PHATRDRAFT_19604 dna mismatch repair protein (MutS_V)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19604 chr_6 dna mismatch repair protein (MutS_V) 227981 229069 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0106
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MutS_V MutS domain V; This domain is found in proteins of the MutS family (DNA mismatch repair proteins)... cl17201 345.322 2.35E-118 126 - 363 specific 249899
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 345.322 2.35E-118 126 - 363 superfamily 266551
MutS_III MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... cl17822 50.8903 1.44E-07 52 - 117 specific 253074
MutS_III superfamily MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... - 50.8903 1.44E-07 52 - 117 superfamily 266862
MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] - 360.832 7.72E-117 24 - 363 multi-dom 223327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32661 Not available 157228 153636 451702 Cre01.g003463.t1.1 AT3G18524.1 261139

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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