PHATRDRAFT_21791 novel protein (ArfGap)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21791	chr_14	novel protein (ArfGap)	362960	363751	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0252

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ArfGap		Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (...	cl02464	158.939	1.87E-49	8 - 138	specific	250600
ArfGap superfamily		Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (...	-	158.939	1.87E-49	8 - 138	superfamily	261296

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261261		Not available	178590	197646	426599	Not available	AT4G05330.1	288477

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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