PHATRDRAFT_22568 glycolate oxidase (FMN_dh)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22568	chr_18	glycolate oxidase (FMN_dh)	378448	379694	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0277

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0002	0.43	470 780

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
alpha_hydroxyacid_oxid_FMN		Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both...	cl17186	359.454	1.05E-122	14 - 364	specific	239203
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	359.454	1.05E-122	14 - 364	superfamily	266538
FMN_dh		FMN-dependent dehydrogenase; FMN-dependent dehydrogenase.	-	398.834	2.01E-137	21 - 371	multi-dom	250340

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
406		Not available	181873	259728	Not available	Cre03.g171300.t1.2	AT4G18360.1	348294

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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