PHATRDRAFT_23794 calm_pytsp calmodulin (PTZ00184)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23794	chr_27	calm_pytsp calmodulin (PTZ00184)	103422	104283	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0186

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0042	0.42	4.5 570

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	76.4325	5.38E-19	12 - 74	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	76.4325	5.38E-19	12 - 74	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	76.4325	5.38E-19	12 - 74	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	76.4325	5.38E-19	12 - 74	superfamily	238008
PTZ00184		calmodulin; Provisional	-	261.234	5.37E-90	1 - 149	multi-dom	185504

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
41291		Not available	272437	239831	373343	Cre03.g178150.t1.1	AT3G43810.1	292780

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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