PHATRDRAFT_26382 nad-dependent epimerase dehydratase (SDR_a5)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_26382	chr_5	nad-dependent epimerase dehydratase (SDR_a5)	34952	35755	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0300

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0139	0.32	4.7 98

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SDR_a5		atypical (a) SDRs, subgroup 5; This subgroup contains atypical SDRs, some of which are identified...	cl09931	168.183	3.53E-51	45 - 250	specific	187554
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	168.183	3.53E-51	45 - 250	superfamily	263925
WcaG		Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate...	-	78.8305	1.94E-17	44 - 242	multi-dom	223528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4718		Not available	170399	317371	Not available	Cre06.g300700.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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