PHATRDRAFT_27246 dna2l protein (AAA_12)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_27246	chr_7	dna2l protein (AAA_12)	890077	891080	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0236	0.25	1900 9700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA_12 superfamily		AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA...	-	198.156	1.27E-62	17 - 244	superfamily	257490
AAA_12 superfamily		AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA...	-	198.156	1.27E-62	17 - 244	superfamily	257490
COG1112		Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and...	-	168.601	2.08E-47	2 - 248	multi-dom	224037

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20248		Not available	188759	209792	463659	Cre12.g528200.t1.1	AT1G08840.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments