PHATRDRAFT_27278 fucoxanthin chlorophyll a c binding protein (Chloroa_b-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_27278	chr_7	fucoxanthin chlorophyll a c binding protein (Chloroa_b-bind)	996410	997124	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0164

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0022	0.39	57000 97000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	58.087	2.11E-11	3 - 86	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	58.087	2.11E-11	3 - 86	superfamily	261492
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	58.087	2.11E-11	3 - 86	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	58.087	2.11E-11	3 - 86	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38879		Not available	218498	264022	Not available	Not available	AT2G34420.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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