PHATRDRAFT_29340 ubiquitin-specific protease 6 (Peptidase_C19 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_29340 chr_16 ubiquitin-specific protease 6 (Peptidase_C19 superfamily) 280107 281807 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0073

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0143
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBL Ubiquitin-like domain of UBL; UBLs function by remodeling the surface of their target proteins,... cl00155 39.1726 0.000268351 8 - 68 specific 176364
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 39.1726 0.000268351 8 - 68 superfamily 260222
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 324.284 2.95E-107 118 - 496 superfamily 261337
UCH Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase. - 175.289 3.73E-50 116 - 495 multi-dom 249862

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39802 Not available 227090 181578 202168 Cre17.g726050.t1.2 AT1G51710.1 504765

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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