PHATRDRAFT_30365 nog1_arath probable nucleolar gtp-binding protein 1 gb (COG1084)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30365	chr_22	nog1_arath probable nucleolar gtp-binding protein 1 gb (COG1084)	304518	306712	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0102	0.21	7 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NOG		Nucleolar GTP-binding protein (NOG); NOG1 is a nucleolar GTP-binding protein present in eukaryotes...	cl17170	280.601	2.50E-90	169 - 341	specific	206684
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	280.601	2.50E-90	169 - 341	superfamily	266525
NOGCT superfamily		NOGCT (NUC087) domain; This C terminal domain is found in the NOG subfamily of nucleolar GTP-...	-	93.1169	6.12E-23	397 - 450	superfamily	191952
NOGCT superfamily		NOGCT (NUC087) domain; This C terminal domain is found in the NOG subfamily of nucleolar GTP-...	-	93.1169	6.12E-23	397 - 450	superfamily	191952
COG1084		Predicted GTPase [General function prediction only]	-	415.549	9.52E-140	5 - 344	multi-dom	224009

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268559		Not available	181044	181740	466218	Cre10.g459500.t1.1	AT1G10300.1	359251

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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