Phatr_hclust_0200 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0009113 | purine base biosynthesis | 0.0103473 | 1 | Phatr_hclust_0200 |
| GO:0007046 | ribosome biogenesis | 0.0154826 | 1 | Phatr_hclust_0200 |
| GO:0006915 | apoptosis | 0.0154826 | 1 | Phatr_hclust_0200 |
| GO:0006354 | RNA elongation | 0.0154826 | 1 | Phatr_hclust_0200 |
| GO:0006446 | regulation of translational initiation | 0.0205926 | 1 | Phatr_hclust_0200 |
| GO:0051205 | protein insertion into membrane | 0.0205926 | 1 | Phatr_hclust_0200 |
| GO:0006189 | 'de novo' IMP biosynthesis | 0.0256773 | 1 | Phatr_hclust_0200 |
| GO:0006568 | tryptophan metabolism | 0.0307368 | 1 | Phatr_hclust_0200 |
| GO:0006396 | RNA processing | 0.0333493 | 1 | Phatr_hclust_0200 |
| GO:0009116 | nucleoside metabolism | 0.0457657 | 1 | Phatr_hclust_0200 |
|
PHATRDRAFT_16141 : protein arginine n-methyltransferase 5 (PRMT5 superfamily) |
PHATRDRAFT_47526 : small nucleolar ribonucleoprotein complex component (Utp12 superfamily) |
PHATRDRAFT_15032 : ribulose-phosphate 3-epimerase (GrpE) |
PHATRDRAFT_10768 : rna-binding s4 domain protein (RsuA) |
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PHATRDRAFT_10251 : (HELICc) |
PHATRDRAFT_47947 : glutamate-rich wd repeat containing 1 (COG2319) |
PHATRDRAFT_35810 : mitochondrial import inner membrane translocase subunit (Tim17 superfamily) |
PHATRDRAFT_12896 : ogd prolylhydroxylase domainfe ii 2- (Ofd1_CTDD) |
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PHATRDRAFT_47446 : heat shock proteindomain protein (DnaJ) |
PHATRDRAFT_14032 : dead deah box (DEADc) |
PHATRDRAFT_9161 : cg6404-isoform b (60KD_IMP) |
PHATRDRAFT_11653 : nucleolar essential protein 1 (EMG1) |
|
PHATRDRAFT_45520 : (PPR_2) |
PHATRDRAFT_50135 : rio kinase 1 (RIO1_euk) |
PHATRDRAFT_33896 : homeobox protein (PHD) |
PHATRDRAFT_28984 : mgc81303 protein (DEADc) |
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PHATRDRAFT_10310 : dna-directed rna polymerase i subunit (Zn-ribbon_RPA12) |
PHATRDRAFT_17772 : (PLN03206) |
PHATRDRAFT_1840 : amidophosphoribosyltransferase (PRK09246) |
PHATRDRAFT_43574 : transducin family protein wd-40 repeat family protein (WD40 superfamily) |
|
PHATRDRAFT_10544 : (DUF1253) |
PHATRDRAFT_17304 : methionine aminopeptidase (PTZ00053) |
PHATRDRAFT_31981 : indole-3-glycerol phosphate synthase (TIM_phosphate_binding superfamily) |
|
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PHATRDRAFT_30965 : radical samcfr familyexpressed (COG0820) |
PHATRDRAFT_16688 : cgi-09 protein (Gcd10p superfamily) |
PHATRDRAFT_45828 : sda1 domain containing 1 (SDA1) |
PHATRDRAFT_42926 : programmed cell death 2-like (PDCD2_C superfamily) |
|
PHATRDRAFT_7346 : mgc53444 protein (Ribosomal_L24e_L24) |
PHATRDRAFT_20773 : loc733436 protein (CBF5) |
PHATRDRAFT_25549 : dead (asp-glu-ala-asp) box polypeptide 56 (DEXDc superfamily) |
PHATRDRAFT_46837 : nop14_mousenucleolar protein 14 (nucleolar complex protein 14) (Nop14) |
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PHATRDRAFT_30365 : nog1_arath probable nucleolar gtp-binding protein 1 gb (COG1084) |
PHATRDRAFT_51570 : holliday junction resolvase (UPF0081) |
PHATRDRAFT_51897 : nucleolar protein 10 (WD40 superfamily) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.511 | 0.000505051 |
| Copper_SH | Copper_SH | 0.426 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.125 | 0.205263 |
| Silver_SH | Silver_SH | -0.144 | 0.0729084 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.255 | 0.00104167 |
| BlueLight_24h | BlueLight_24h | 0.577 | 0.00128205 |
| GreenLight_0.5h | GreenLight_0.5h | 0.999 | 0.000458716 |
| RedLight_6h | RedLight_6h | -0.774 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.445 | 0.000961538 |
| light_6hr | light_6hr | -1.460 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.981 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | -0.111 | 0.16875 |
| Ammonia_SH | Ammonia_SH | 4.996 | 0.000344828 |
| Simazine_SH | Simazine_SH | -0.810 | 0.000423729 |
| Oil_SH | Oil_SH | 0.448 | 0.000666667 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.017 | 0.85523 |
| Cadmium_SH | Cadmium_SH | -0.123 | 0.20177 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.256 | 0.0493827 |
| highlight_0to6h | highlight_0to6h | 0.620 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | 1.001 | 0.00482759 |
| Dispersant_SH | Dispersant_SH | 0.053 | 0.553599 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.166 | 0.0905941 |
| light_15.5hr | light_15.5hr | 0.083 | 0.708578 |
| light_10.5hr | light_10.5hr | -1.608 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.008 | 0.933676 |
| Si_free | Si_free | 0.094 | 0.388272 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 1.021 | 0.000746269 |
| Mixture_SH | Mixture_SH | 4.767 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.161 | 0.336389 |
| light_16hr_dark_30min | light_16hr_dark_30min | 0.076 | 0.765891 |
| BlueLight_6h | BlueLight_6h | -0.612 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 1.339 | 0.000555556 |
| RedLight_24h | RedLight_24h | 0.321 | 0.00675676 |
| Dark_treated | Dark_treated | -2.172 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.501 | 0.00111111 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.102 | 0.00185185 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.132 | 0.0323077 |
| RedLight_0.5h | RedLight_0.5h | 1.141 | 0.000555556 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.272 | 0.0674699 |
| Re-illuminated_24h | Re-illuminated_24h | 0.734 | 0.000657895 |
