PHATRDRAFT_32758 dead box rna helicase (PRK04837)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_32758 chr_2 dead box rna helicase (PRK04837) 735083 736618 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0201

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0237
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 128.124 2.65E-35 270 - 401 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 128.124 2.65E-35 270 - 401 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 148.402 9.80E-42 15 - 257 superfamily 266587
PRK04837 ATP-dependent RNA helicase RhlB; Provisional - 164.759 2.31E-45 35 - 466 multi-dom 235314

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33252 Not available 138190 256982 51983 Cre05.g238900.t1.1 AT3G09720.1 555670

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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