Phatr_hclust_0201 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0016071 | mRNA metabolism | 0.0000401 | 0.126828 | Phatr_hclust_0201 |
| GO:0008283 | cell proliferation | 0.00542673 | 1 | Phatr_hclust_0201 |
| GO:0042254 | ribosome biogenesis and assembly | 0.0162 | 1 | Phatr_hclust_0201 |
| GO:0006364 | rRNA processing | 0.0215467 | 1 | Phatr_hclust_0201 |
| GO:0007186 | G-protein coupled receptor protein signaling pathway | 0.0347981 | 1 | Phatr_hclust_0201 |
| GO:0006807 | nitrogen compound metabolism | 0.0374288 | 1 | Phatr_hclust_0201 |
| GO:0019538 | protein metabolism | 0.0936787 | 1 | Phatr_hclust_0201 |
| GO:0006396 | RNA processing | 0.142204 | 1 | Phatr_hclust_0201 |
| GO:0006457 | protein folding | 0.275986 | 1 | Phatr_hclust_0201 |
| GO:0006412 | protein biosynthesis | 0.360385 | 1 | Phatr_hclust_0201 |
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PHATRDRAFT_42570 : ribosomal rna processing 12 homolog (NUC173 superfamily) |
PHATRDRAFT_46994 : u3 snornp protein (Mpp10) |
PHATRDRAFT_44555 : zz domain protein (Kri1_C) |
PHATRDRAFT_19647 : brix domain containing 1 (Brix superfamily) |
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PHATRDRAFT_25133 : nog2_klula nucleolar gtp-binding protein 2 (NGP_1) |
PHATRDRAFT_8777 : at3g22660 mwi23_3 (Ebp2 superfamily) |
PHATRDRAFT_12144 : chromosome 1 open reading frame 33 (Ribosomal_P0_like) |
PHATRDRAFT_31725 : (PIN_Nob1) |
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PHATRDRAFT_49450 : rrna processing protein rrp7 (RRP7_like superfamily) |
PHATRDRAFT_44055 : 23s rrna (uracil-5-)-methyltransferase (meth_trns_rumB) |
PHATRDRAFT_47058 : (Pumilio superfamily) |
PHATRDRAFT_14068 : chromosome 9 open reading frame 114 (Methyltrn_RNA_3) |
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PHATRDRAFT_41002 : thif family (YgdL_like) |
PHATRDRAFT_14450 : ribosomal protein l7 (Ribosomal_L7_archeal_euk) |
PHATRDRAFT_45844 : at1g04130 f20d22_10 (TPR) |
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PHATRDRAFT_44047 : wd repeats and sof domain containing 1 (COG2319) |
PHATRDRAFT_45888 : nucleolar complex associated 4 homolog (CBF) |
PHATRDRAFT_12140 : chaperonedomain protein (DnaJ) |
PHATRDRAFT_49433 : (COG5638) |
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PHATRDRAFT_32036 : noc2l_arath nucleolar complex protein 2 homolog (protein noc2 homolog) (Noc2 superfamily) |
PHATRDRAFT_45727 : mak5_emeni atp-dependent rna helicase mak5 (SrmB) |
PHATRDRAFT_23865 : atp-dependent rna helicase-like protein (HA2) |
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PHATRDRAFT_54038 : af155362_1charged amino acid rich leucine zipper factor-1 (Sas10) |
PHATRDRAFT_12322 : exosome component 6 (RNase_PH superfamily) |
PHATRDRAFT_48320 : phytanoyl-dioxygenase family protein (PhyH superfamily) |
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PHATRDRAFT_50630 : ccaat enhancer binding protein zeta isoform 2 (COG5593) |
PHATRDRAFT_48486 : histone tail methylase containing set domain (SET) |
PHATRDRAFT_38930 : carbon-nitrogen hydrolase (CPA) |
PHATRDRAFT_22658 : rna cyclase homolog (18S_RNA_Rcl1p) |
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PHATRDRAFT_46259 : rna-dependent helicase (DEADc) |
PHATRDRAFT_13820 : bystin family protein (Bystin) |
PHATRDRAFT_32758 : dead box rna helicase (PRK04837) |
PHATRDRAFT_48417 : (P4Hc) |
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PHATRDRAFT_15862 : (NMD3) |
PHATRDRAFT_16814 : bop1-prov protein (BOP1NT) |
PHATRDRAFT_37596 : ltv1 homolog (LTV) |
PHATRDRAFT_50246 : (Utp14) |
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PHATRDRAFT_17974 : rnu3ip2 protein (WD40 superfamily) |
PHATRDRAFT_9989 : dead (asp-glu-ala-asp) box polypeptide 55 (SrmB) |
PHATRDRAFT_40070 : nucleolar protein with mif4g domain 1 (MIF4G) |
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PHATRDRAFT_10782 : rna helicase (DEADc) |
PHATRDRAFT_46846 : glioma tumor suppressor candidate region gene 2 isoform 4 (Nop53) |
PHATRDRAFT_47014 : rna binding s1 domain protein (S1_like) |
PHATRDRAFT_55141 : exosome complex exonuclease rrp42 (ribosomal rna processing protein 42 (RNase_PH superfamily) |
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PHATRDRAFT_21538 : utp11-u3 small nucleolar ribonucleoprotein (Utp11) |
PHATRDRAFT_20740 : rna binding motif protein 19 (RRM3_RBM19_RRM2_MRD1) |
PHATRDRAFT_14145 : pescadillo n-terminus family protein (NOP7) |
PHATRDRAFT_16633 : rna-binding protein (RRM_1) |
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PHATRDRAFT_45441 : mis3_schpo ribosomal rna assembly protein mis3 (COG1094) |
PHATRDRAFT_22868 : notchless protein homolog (WD40) |
PHATRDRAFT_42302 : methyltransferase wbscr22 (williams-beuren syndrome chromosome region 22 protein homolog) (WBS_methylT) |
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PHATRDRAFT_25394 : loc100036868 protein (nop2p) |
PHATRDRAFT_27905 : peter pan homolog (Brix) |
PHATRDRAFT_51007 : u3 small nucleolar ribonucleoprotein protein (Brix) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -1.126 | 0.000505051 |
| Copper_SH | Copper_SH | 0.280 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.218 | 0.003125 |
| Silver_SH | Silver_SH | -0.321 | 0.000555556 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.230 | 0.00104167 |
| BlueLight_24h | BlueLight_24h | 0.560 | 0.00128205 |
| GreenLight_0.5h | GreenLight_0.5h | 1.090 | 0.000458716 |
| RedLight_6h | RedLight_6h | -1.564 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.373 | 0.000961538 |
| light_6hr | light_6hr | -1.676 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -1.159 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | -0.094 | 0.114904 |
| Ammonia_SH | Ammonia_SH | 4.286 | 0.000344828 |
| Simazine_SH | Simazine_SH | -0.254 | 0.00143885 |
| Oil_SH | Oil_SH | 0.266 | 0.000666667 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.103 | 0.180251 |
| Cadmium_SH | Cadmium_SH | -0.090 | 0.241176 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.406 | 0.00166667 |
| highlight_0to6h | highlight_0to6h | 0.622 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | 1.223 | 0.000462963 |
| Dispersant_SH | Dispersant_SH | -0.021 | 0.79842 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.196 | 0.00903615 |
| light_15.5hr | light_15.5hr | -0.032 | 0.851645 |
| light_10.5hr | light_10.5hr | -1.610 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.152 | 0.0361257 |
| Si_free | Si_free | 0.171 | 0.0948276 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 1.317 | 0.000396825 |
| Mixture_SH | Mixture_SH | 4.114 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.285 | 0.0113636 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.002 | 0.9958 |
| BlueLight_6h | BlueLight_6h | -1.279 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 1.200 | 0.000555556 |
| RedLight_24h | RedLight_24h | 0.155 | 0.135789 |
| Dark_treated | Dark_treated | -1.085 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -1.186 | 0.000609756 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.161 | 0.00185185 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.187 | 0.00135135 |
| RedLight_0.5h | RedLight_0.5h | 1.195 | 0.000555556 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.379 | 0.0015625 |
| Re-illuminated_24h | Re-illuminated_24h | 0.569 | 0.000657895 |
