PHATRDRAFT_34493 translation elongation factor ef-subunit (TEF1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34493 chr_5 translation elongation factor ef-subunit (TEF1) 709608 710951 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0139

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EF1_alpha Elongation Factor 1-alpha (EF1-alpha) protein family; EF1 is responsible for the GTP-dependent... cl17170 373.75 1.75E-128 11 - 241 specific 206670
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 373.75 1.75E-128 11 - 241 superfamily 266525
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 104.94 9.80E-28 249 - 329 superfamily 261449
Translation_factor_III superfamily Domain III of Elongation factor (EF) Tu (EF-TU) and EF-G. Elongation factors (EF) EF-Tu and EF-G... - 105.446 1.30E-27 336 - 442 superfamily 261448
TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] - 469.086 1.01E-162 3 - 444 multi-dom 227581

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34303 Not available 214962 205003 428552 Cre06.g284750.t1.2 AT1G18070.2 356229

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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