PHATRDRAFT_36013 arginyl-trna synthetase (PLN02286)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36013 chr_9 arginyl-trna synthetase (PLN02286) 343560 345281 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0135

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0214
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArgRS_core catalytic core domain of arginyl-tRNA synthetases; Arginyl tRNA synthetase (ArgRS) catalytic core... cl00015 237.462 3.51E-74 93 - 373 specific 185675
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 237.462 3.51E-74 93 - 373 superfamily 260139
Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases; This domain is found in arginyl tRNA... cl12020 175.095 1.51E-51 413 - 573 specific 153410
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 175.095 1.51E-51 413 - 573 superfamily 264512
Arg_tRNA_synt_N Arginyl tRNA synthetase N terminal domain; This domain is found at the amino terminus of Arginyl... cl04104 79.2336 6.95E-18 1 - 63 specific 251994
Arg_tRNA_synt_N superfamily Arginyl tRNA synthetase N terminal domain; This domain is found at the amino terminus of Arginyl... - 79.2336 6.95E-18 1 - 63 superfamily 262026
PLN02286 arginine-tRNA ligase - 907.479 0 1 - 573 multi-dom 215160

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40028 Not available 229753 217370 426871 Cre03.g143887.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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