PHATRDRAFT_38085 thiamin biosynthesis protein (PLN02444)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38085 chr_15 thiamin biosynthesis protein (PLN02444) 28878 31246 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0123

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0067
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ThiC ThiC family; ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine... cl08031 807.448 0 143 - 566 specific 250998
ThiC superfamily ThiC family; ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine... - 807.448 0 143 - 566 superfamily 263521
ThiC-associated superfamily ThiC-associated domain; This domain is most frequently found at the N-terminus of the ThiC family... - 60.9677 1.49E-11 69 - 135 superfamily 257973
PLN02444 HMP-P synthase - 1200.9 0 1 - 613 multi-dom 215243

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41733 Not available 229770 255053 Not available Cre05.g240850.t1.2 AT2G29630.3 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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