PHATRDRAFT_41031 sec61 signal peptide plus 9 transmembrane domain-containing protein (PTZ00219)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41031 chr_27 sec61 signal peptide plus 9 transmembrane domain-containing protein (PTZ00219) 187409 189221 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0223

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0024
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SecY superfamily SecY translocase; SecY translocase. - 244.746 2.43E-76 73 - 457 superfamily 249786
SecY superfamily SecY translocase; SecY translocase. - 244.746 2.43E-76 73 - 457 superfamily 249786
Plug_translocon superfamily Plug domain of Sec61p; The Sec61/SecY translocon mediates translocation of proteins across the... - 65.1386 1.47E-13 38 - 72 superfamily 256059
Plug_translocon superfamily Plug domain of Sec61p; The Sec61/SecY translocon mediates translocation of proteins across the... - 65.1386 1.47E-13 38 - 72 superfamily 256059
PTZ00219 Sec61 alpha subunit; Provisional - 858.924 0 1 - 470 multi-dom 185519

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25355 Not available 205448 192607 457349 Cre03.g171350.t1.2 AT1G29310.1 284123

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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