PHATRDRAFT_42743 membrane protein (Rhomboid)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42743 chr_1 membrane protein (Rhomboid) 947126 949270 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0097

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0144
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rhomboid Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... cl11446 136.969 1.23E-37 383 - 530 specific 250801
Rhomboid superfamily Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... - 136.969 1.23E-37 383 - 530 superfamily 264372

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36911 Not available 227230 202464 449194 Not available AT2G29050.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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