Phatr_hclust_0097 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0007067 mitosis 0.000100669 0.317308 Phatr_hclust_0097
GO:0051276 chromosome organization and biogenesis 0.000200608 0.629108 Phatr_hclust_0097
GO:0000074 regulation of cell cycle 0.000970899 1 Phatr_hclust_0097
GO:0006468 protein amino acid phosphorylation 0.00287233 1 Phatr_hclust_0097
GO:0030261 chromosome condensation 0.00592739 1 Phatr_hclust_0097
GO:0000278 mitotic cell cycle 0.00592739 1 Phatr_hclust_0097
GO:0007018 microtubule-based movement 0.013239 1 Phatr_hclust_0097
GO:0009186 deoxyribonucleoside diphosphate metabolism 0.0176813 1 Phatr_hclust_0097
GO:0016051 carbohydrate biosynthesis 0.0235082 1 Phatr_hclust_0097
GO:0006730 one-carbon compound metabolism 0.0235082 1 Phatr_hclust_0097

Members

PHATRDRAFT_47517 : gyltl1b protein (Glyco_transf_49 superfamily)
PHATRDRAFT_44165 : (Smc)
PHATRDRAFT_44270 : (SET)
PHATRDRAFT_21410 : mitogen-activated protein kinase (STKc_MAPK)
PHATRDRAFT_35856 :
PHATRDRAFT_9158 : kinesin (kar3 subfamily) (Motor_domain superfamily)
PHATRDRAFT_47533 :
PHATRDRAFT_42743 : membrane protein (Rhomboid)
PHATRDRAFT_49115 : (AlgLyase superfamily)
PHATRDRAFT_50016 : lipopolysaccharide a protein (CAP10 superfamily)
PHATRDRAFT_43823 :
PHATRDRAFT_50280 : mgc81656 protein (DUF1032 superfamily)
PHATRDRAFT_33755 :
PHATRDRAFT_42993 : 200 kda antigen p200 (PTZ00121)
PHATRDRAFT_47053 :
PHATRDRAFT_32848 : mcm10_schpo dna replication licensing factor mcm10 (minichromosome maintenance protein 10) (cdc23 protein)
PHATRDRAFT_49838 : myb-like dna-bindingshaqkyf class family protein (SANT)
PHATRDRAFT_43956 : condensin subunit 1 (COG5098)
PHATRDRAFT_49082 :
PHATRDRAFT_44469 :
PHATRDRAFT_39650 :
PHATRDRAFT_15016 : transcription factor c-myb (SANT)
PHATRDRAFT_47734 : proteophosphoglycan ppg4
PHATRDRAFT_48451 : (CHAT superfamily)
PHATRDRAFT_43122 : protein regulator of cytokinesis 1 isoform 2 (MAP65_ASE1)
PHATRDRAFT_33588 :
PHATRDRAFT_8598 : b-type cyclin (CYCLIN)
PHATRDRAFT_42914 : (PRK12323)
PHATRDRAFT_35036 :
PHATRDRAFT_45552 :
PHATRDRAFT_47557 :
PHATRDRAFT_44194 :
PHATRDRAFT_38865 : cyclin d1
PHATRDRAFT_49305 :
PHATRDRAFT_44947 : (PKc_like superfamily)
PHATRDRAFT_46249 : (Alginate_lyase)
PHATRDRAFT_46000 :
PHATRDRAFT_38652 : (Motor_domain superfamily)
PHATRDRAFT_2845 : protein serine threonine kinase (STKc_MAPKKK)
PHATRDRAFT_13706 : long chain (FMN_red superfamily)
PHATRDRAFT_49129 :
PHATRDRAFT_47045 : viral a-type inclusion
PHATRDRAFT_46659 :
PHATRDRAFT_46392 :
PHATRDRAFT_50635 : (Alginate_lyase)
PHATRDRAFT_49227 : (Anoctamin)
PHATRDRAFT_37774 :
PHATRDRAFT_42946 : (Got1)
PHATRDRAFT_39117 : two component regulator three y domain protein
PHATRDRAFT_13028 : sprt-like metalloprotease (SprT-like)
PHATRDRAFT_44271 : (SET)
PHATRDRAFT_47534 :
PHATRDRAFT_36590 :
PHATRDRAFT_47205 : (SANT)
PHATRDRAFT_10628 : polo-like kinase 1 (S_TKc)
PHATRDRAFT_48735 : chu large protein
PHATRDRAFT_39317 :
PHATRDRAFT_47359 :
PHATRDRAFT_32962 :
PHATRDRAFT_45019 :
PHATRDRAFT_44464 :
PHATRDRAFT_34026 : mkiaa0609 protein (Glyco_transf_49 superfamily)
PHATRDRAFT_50129 :
PHATRDRAFT_47992 : serine threonine protein kinase (PKc_like superfamily)
PHATRDRAFT_47965 : wd repeat domain 18 (WD40 superfamily)
PHATRDRAFT_46380 :
PHATRDRAFT_36337 : myb-like dna-binding domain containing protein (SANT)
PHATRDRAFT_38917 : dihydrofolate reductase (FSH1 superfamily)
PHATRDRAFT_4344 : lrr protein
PHATRDRAFT_49304 :
PHATRDRAFT_41098 :
PHATRDRAFT_31453 :
PHATRDRAFT_42574 : (alpha_CA superfamily)
PHATRDRAFT_43718 :
PHATRDRAFT_52174 : dna topoisomerase ii (PLN03128)
PHATRDRAFT_47592 :
PHATRDRAFT_50365 : myb-like dna-binding domain containing protein (SANT)
PHATRDRAFT_44848 :
PHATRDRAFT_44300 :
PHATRDRAFT_35694 :
PHATRDRAFT_21455 : dynamin related protein involved in chloroplast division (Ras_like_GTPase superfamily)
PHATRDRAFT_47397 :
PHATRDRAFT_43546 :
PHATRDRAFT_39065 :
PHATRDRAFT_35525 :
PHATRDRAFT_43196 : metalloprotease mep1 homolog (ZnMc superfamily)
PHATRDRAFT_36284 : loc398069 protein (Cnd2 superfamily)
PHATRDRAFT_47738 :
PHATRDRAFT_50429 : secreted lipopolysaccharide sugar transferase like family 8 glycosyltransferase (Glyco_tranf_GTA_type superfamily)
PHATRDRAFT_47761 : glycoprotein 340
PHATRDRAFT_37787 :
PHATRDRAFT_43757 : cyclin a
PHATRDRAFT_48333 :
PHATRDRAFT_47179 : excision repair cross-complementing rodent repair deficiency complementation group 6 - like (SNF2_N)
PHATRDRAFT_49269 :
PHATRDRAFT_37463 :
PHATRDRAFT_48674 :
PHATRDRAFT_48434 :
PHATRDRAFT_46513 :
PHATRDRAFT_49302 :
PHATRDRAFT_49507 : (Cnd1)
PHATRDRAFT_23281 : nrs er (nucleotide-rhamnose synthase epimerase-reductase) (PLN02778)
PHATRDRAFT_49467 :
PHATRDRAFT_34868 :
PHATRDRAFT_30352 : (Smc)
PHATRDRAFT_35642 :
PHATRDRAFT_46705 :
PHATRDRAFT_48673 :

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.004 0.984909
Copper_SH Copper_SH 0.576 0.000515464
Green_vs_Red_24h Green_vs_Red_24h -0.160 0.0075
Silver_SH Silver_SH -0.102 0.0510822
Cadmium_1.2mg Cadmium_1.2mg -0.040 0.252821
BlueLight_24h BlueLight_24h -0.106 0.466216
GreenLight_0.5h GreenLight_0.5h -2.981 0.000458716
RedLight_6h RedLight_6h 0.546 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h -0.103 0.363203
light_6hr light_6hr 0.494 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.155 0.0789604
Blue_vs_Green_6h Blue_vs_Green_6h 0.010 0.879327
Ammonia_SH Ammonia_SH -2.342 0.000344828
Simazine_SH Simazine_SH 0.351 0.000423729
Oil_SH Oil_SH 0.180 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH 0.556 0.000609756
Cadmium_SH Cadmium_SH 0.109 0.0710526
Blue_vs_Red_24h Blue_vs_Red_24h -0.163 0.0405405
highlight_0to6h highlight_0to6h 0.112 0.246948
BlueLight_0.5h BlueLight_0.5h -2.970 0.000462963
Dispersant_SH Dispersant_SH -0.218 0.000909091
light_16hr_dark_4hr light_16hr_dark_4hr 0.935 0.000943396
light_15.5hr light_15.5hr 1.808 0.000625
light_10.5hr light_10.5hr 1.138 0.000561798
Dispersed_oil_SH Dispersed_oil_SH 0.073 0.211883
Si_free Si_free -0.173 0.00833333
Re-illuminated_0.5h Re-illuminated_0.5h -2.834 0.000396825
Mixture_SH Mixture_SH -2.596 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h -0.289 0.0016129
light_16hr_dark_30min light_16hr_dark_30min 1.766 0.000735294
BlueLight_6h BlueLight_6h 0.257 0.000581395
highlight_12to48h highlight_12to48h 0.400 0.000555556
RedLight_24h RedLight_24h 0.057 0.56662
Dark_treated Dark_treated -3.423 0.000446429
GreenLight_6h GreenLight_6h 0.247 0.000609756
Cadmium_0.12mg Cadmium_0.12mg -0.033 0.065534
Blue_vs_Green_24h Blue_vs_Green_24h -0.003 0.969433
RedLight_0.5h RedLight_0.5h -3.234 0.000555556
Green_vs_Red_6h Green_vs_Red_6h -0.299 0.0015625
Re-illuminated_24h Re-illuminated_24h 0.518 0.000657895

Motifs

MEME Output