PHATRDRAFT_44935 (zf-CW)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44935 chr_5 (zf-CW) 681095 687821 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0045

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0245
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 1.22E-12 1779 - 1828 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 1.22E-12 1779 - 1828 superfamily 254236
SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain; Putative methyl transferase, based on... cl02566 62.3519 6.65E-11 826 - 957 specific 214614
SET superfamily SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... - 62.3519 6.65E-11 826 - 957 superfamily 261347
HMG high mobility group; high mobility group. cl00082 38.8359 0.00217083 1110 - 1183 specific 197700
HMG-box superfamily High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and... - 38.8359 0.00217083 1110 - 1183 superfamily 260179

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22757 Not available 259554 260181 Not available Cre17.g742700.t1.1 AT4G15180.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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